PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr014249.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 290aa    MW: 32800.6 Da    PI: 4.6455
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr014249.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM49.61.3e-15171462128
          NAM   2 ppGfrFhPtdeelvveyLkkkvegkk...leleevikevd.iykvePwdLpkkvka...eekewyfFskrdkkyatgkrknr.atksgyWkatgkdke 91 
                  p GfrF+Ptd+elv +yL ++v + +     + ++++e+d   ++ePw + +++ +    ++++y F + +     ++  +r + + g+W+++   k+
  Pbr014249.1  17 PLGFRFRPTDQELVGFYLSNRVIAGEqfmAYCRSFVHEFDpFGETEPWVIWENFGGrslVDQDLYLFYELHYL--PSSYIKRtIDAGGTWSQSS-YKT 111
                  89*****************99766664643344569***735689*****75333322255688988887654..34555662556899*9765.589 PP

          NAM  92 vlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                  v++ +g+ +g k+ + +   ++   + + W+++ey l
  Pbr014249.1 112 VKDFDGKSIGDKRCFKYK--NEGCEQDCGWLLEEYIL 146
                  9999************98..4445579********76 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.18E-1713172IPR003441NAC domain
PROSITE profilePS5100522.17116173IPR003441NAC domain
PfamPF023652.1E-1317145IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    Send to blast
MANFYGNGLV RSYGDVPLGF RFRPTDQELV GFYLSNRVIA GEQFMAYCRS FVHEFDPFGE  60
TEPWVIWENF GGRSLVDQDL YLFYELHYLP SSYIKRTIDA GGTWSQSSYK TVKDFDGKSI  120
GDKRCFKYKN EGCEQDCGWL LEEYILNQTQ EIVDGNGSDH KSRKVVLCRL KKNPRCANKT  180
DRPTQELKEK PENKRARISS SLVHFDERNK KISGTNQDQE CKSGIDLNAM PPDFSDHDCL  240
TTTSGVCSCP ICLDGGGGEP LLEDEDDEDS LKDVDLSLGP KVLPQFDET*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009371544.10.0PREDICTED: NAC transcription factor 29-like
TrEMBLM5W3I12e-56M5W3I1_PRUPE; Uncharacterized protein (Fragment)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF12591634
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46770.16e-09NAC family protein